MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Bacteroides acidifaciens
19428wH3_P2318
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
NCBI Genome Annotation:
contigs: 233
bases: 5,137,552 bps
CDS: 4,335
rRNA: 8
tRNA: 72
tmRNA: 1
Total number of protein coding genes annotated/found:
4,123
Display
20
50
100
All items per page
Items 1 - 20
🡆
click arrow to navigate by page or
of 207 pages
Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA)
Range ^
Gene Product Name
SEQF5013|JADGKQ010000045.1
MBF0731067.1
Genome Viewer
NA
AA
6816/2272
9615-16430
AAA family ATPase
SEQF5013|JADGKQ010000006.1
MBF0728870.1
Genome Viewer
NA
AA
6171/2057
71968-78138
hypothetical protein
SEQF5013|JADGKQ010000016.1
MBF0729664.1
Genome Viewer
NA
AA
5850/1950
20029-25878
N-6 DNA methylase
SEQF5013|JADGKQ010000001.1
MBF0728178.1
Genome Viewer
NA
AA
5745/1915
250242-244498
alpha-2-macroglobulin
SEQF5013|JADGKQ010000002.1
MBF0728328.1
Genome Viewer
NA
AA
5637/1879
218215-212579
alpha-2-macroglobulin
SEQF5013|JADGKQ010000022.1
MBF0730070.1
Genome Viewer
NA
AA
5412/1804
43459-38048
phage tail tape measure protein
SEQF5013|JADGKQ010000024.1
MBF0730230.1
Genome Viewer
NA
AA
5130/1710
65891-60762
DUF4433 domain-containing protein
SEQF5013|JADGKQ010000040.1
MBF0730906.1
Genome Viewer
NA
AA
5061/1687
24243-29303
DUF4132 domain-containing protein
SEQF5013|JADGKQ010000002.1
MBF0728212.1
Genome Viewer
NA
AA
4875/1625
37864-32990
RecQ family ATP-dependent DNA helicase
SEQF5013|JADGKQ010000032.1
MBF0730627.1
Genome Viewer
NA
AA
4569/1523
27680-32248
glutamate synthase large subunit
SEQF5013|JADGKQ010000001.1
MBF0728145.1
Genome Viewer
NA
AA
4560/1520
199298-194739
response regulator
SEQF5013|JADGKQ010000051.1
MBF0731223.1
Genome Viewer
NA
AA
4512/1504
25465-20954
translocation/assembly module TamB domain-containing protein
SEQF5013|JADGKQ010000050.1
MBF0731207.1
Genome Viewer
NA
AA
4446/1482
29127-33572
translocation/assembly module TamB
SEQF5013|JADGKQ010000015.1
MBF0729612.1
Genome Viewer
NA
AA
4320/1440
54568-50249
DUF5113 domain-containing protein
SEQF5013|JADGKQ010000015.1
MBF0729564.1
Genome Viewer
NA
AA
4302/1434
17985-13684
phage tail tape measure protein
SEQF5013|JADGKQ010000020.1
MBF0729948.1
Genome Viewer
NA
AA
4284/1428
13705-17988
DNA-directed RNA polymerase subunit beta'
SEQF5013|JADGKQ010000006.1
MBF0728915.1
Genome Viewer
NA
AA
4281/1427
130212-125932
response regulator
SEQF5013|JADGKQ010000024.1
MBF0730231.1
Genome Viewer
NA
AA
4194/1398
70087-65894
S1 RNA-binding domain-containing protein
SEQF5013|JADGKQ010000013.1
MBF0729423.1
Genome Viewer
NA
AA
4191/1397
56065-51875
hypothetical protein
SEQF5013|JADGKQ010000049.1
MBF0731180.1
Genome Viewer
NA
AA
4113/1371
25534-29646
response regulator
Items 1 - 20
🡆
click arrow to navigate by page or
of 207 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI,UID,Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by